51 Commits

Author SHA1 Message Date
Alex Selimov
30dbd3bfc7 Latest working version of cacmb 2021-07-14 13:11:50 -04:00
Alex Selimov
8fd45dc461 Add all new option 2021-06-26 15:46:56 -04:00
Alex Selimov
0e41c7acc9 Lots of updates to cacmb 2021-06-14 10:23:26 -04:00
Alex Selimov
e3dba9029a Fix bug for writing to .xyz file after delete 2021-04-22 12:49:28 -04:00
Alex Selimov
85135e7c95 More compatability fixes for new version of CAC 2021-03-06 01:49:29 -05:00
Alex Selimov
2e7571cfa5 Update to change style of restart and pycac.out files 2021-02-16 09:37:25 -05:00
Alex Selimov
fc8186f3a1 Update to match new cac inputs/output formats 2021-02-15 14:33:17 -05:00
Alex Selimov
2c42520102 Restructure group code, add group shell, and add refinefill option 2020-12-02 16:28:10 -05:00
Alex Selimov
153b95194f Mode calc with tot_virial calculation 2020-11-01 21:08:42 -05:00
Alex Selimov
4dcaddb2cb Manual merge of control box code 2020-10-30 19:38:27 -04:00
Alex Selimov
0929400d19 Merge branch 'ft--option-slip-plane' into development 2020-10-28 17:53:28 -04:00
Alex Selimov
068b5d99a9 Fix to gfortran compatibility 2020-10-28 17:51:23 -04:00
Alex Selimov
b9ce916e42 Current working changes to option-slip-plane 2020-10-27 13:23:00 -04:00
Alex Selimov
fa38875296 merge changes 2020-10-27 10:09:13 -04:00
Alex Selimov
51079148cc Get code working with gfortran 2020-10-24 09:53:58 -04:00
Alex Selimov
f63335708b Working changes 2020-10-24 09:13:16 -04:00
Alex Selimov
22e250093b Working changes. Working on the efill code 2020-10-23 17:17:40 -04:00
Alex Selimov
b5629b1563 Working changes to slip_plane code 2020-10-23 14:13:35 -04:00
Alex Selimov
2ea388b82a Current working changes with some updates to comments for accuracy 2020-10-23 11:37:28 -04:00
Alex Selimov
6e08517697 Working continuum metric calculation code 2020-10-20 01:03:31 -04:00
Alex Selimov
95e2ad0b4d Current working changes to control-box code 2020-10-19 15:14:12 -04:00
Alex Selimov
5949f04103 Working read from pycac.out file format 2020-10-16 19:48:06 -04:00
Alex Selimov
724e573287 Added deform box option and allowed for reading time information from restart files 2020-08-10 15:52:19 -04:00
Alex Selimov
8d939ed942 Merge bcc to development branch 2020-07-06 16:17:55 -04:00
Alex Selimov
2fda952d3f Merge read-cac branch into main branch 2020-06-30 10:58:07 -04:00
Alex Selimov
a47c384a3f Added tags to the element and atom arrays 2020-06-29 18:51:01 -04:00
Alex Selimov
b52d7761e0 First working version of reading in .cac format. Works for two separate orientations 2020-06-02 16:42:12 -04:00
Alex Selimov
9ccc5f1caf Replaced sorting method which resulted in broken deletion algorithm 2020-05-18 10:38:01 -04:00
Alex Selimov
3a59b23be7 Working bcc crystal structure when viewing in .lmp or .vtk format 2020-04-25 14:42:57 -04:00
Alex Selimov
4038cab76f Latest working changes to read-CAC 2020-04-23 12:17:04 -04:00
Alex Selimov
b3e05da6a4 Working changes for reading .cac files 2020-04-22 12:52:37 -04:00
Alex Selimov
acd902db4b working changes to bcc files 2020-04-21 13:25:33 -04:00
Alex Selimov
44a9dbaead Add tol variable replacing lim_zero as a tolerance for real checks 2020-03-13 15:11:22 -04:00
Alex Selimov
0ad06a2d6b Working changes to boundary command 2020-03-05 16:19:30 -05:00
Alex Selimov
1a30968dca Added the rand element code 2020-03-04 21:04:39 -05:00
Alex Selimov
27faeee5ea Working code which picks random position slightly outside element bounds 2020-03-02 12:24:22 -05:00
Alex Selimov
44efb4be4a Added orient and unorient options 2020-02-03 17:30:41 -05:00
Alex
dc42b7b925 Separated wrap option to reduce opy and pasted code. Fixed warnings and added wrapping when inserting a dislocation or loop 2020-01-29 10:25:33 -05:00
Alex Selimov
fd143783ec Added remesh option to group 2020-01-28 09:36:00 -05:00
Alex Selimov
849da1d24a Changes to how the adjustment to nodal positions is performed for lammpscac output 2020-01-15 09:39:30 -05:00
Alex Selimov
c89b7d3b59 Merge branch 'ft--opt-dislloop' into development 2020-01-13 20:24:15 -05:00
Alex Selimov
fbae3a1594 Working version of CACmb capable of building simple models for lammpsCAC 2020-01-13 20:12:46 -05:00
Alex Selimov
8fc91f4dd2 Working planar vacancy cluster algorithm 2020-01-13 09:42:57 -05:00
Alex Selimov
b3a9577cc2 Added writing to pycac restart file format 2019-12-15 17:55:31 -05:00
Alex Selimov
c291ec65b4 Quick bug fix 2019-12-13 13:44:17 -05:00
Alex
fb2abc60d1 Updates to box variables adding new sub_box variables and propagating changes through all of the modes 2019-12-07 13:38:52 -05:00
Alex Selimov
03f69c6df7 Removed extra variables from mode_create.f90, added a new module to contain simulation box information and changed code accordingly, new grow subroutine in elements. 2019-12-05 11:03:18 -05:00
Alex Selimov
fa1cb6ce58 Fixes to mode_create, moved basis_pos from elements to mode_create, added the mb file output style 2019-12-05 08:36:22 -05:00
Alex
ff3fc5e20a First working version of model builder with several output file types and mode_create working 2019-11-27 15:10:28 -05:00
Alex
8217e8b51c Initial commit with file writing and create mode working for atoms 2019-11-25 18:19:25 -05:00