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import os
import subprocess
import tempfile
import yaml
import color
try:
import pybtex
import pybtex.database
import pybtex.database.input
import pybtex.database.input.bibtex
import pybtex.database.input.bibtexml
import pybtex.database.input.bibyaml
import pybtex.database.output
import pybtex.database.output.bibtex
import pybtex.database.output.bibtexml
import pybtex.database.output.bibyaml
except ImportError:
print '{}error{}: you need to install Pybtex; try running \'pip install'
'pybtex\' or \'easy_install pybtex\''.format(color.red, color.end)
_papersdir = None
try:
EDITOR = os.environ['EDITOR']
except KeyError:
EDITOR = 'nano'
BIB_EXTENSIONS = ['.bib', '.bibyaml', '.bibml', '.yaml']
def clean_path(path):
return os.path.abspath(os.path.expanduser(path))
def find_papersdir():
"""Find .papers directory in this directory and the parent directories"""
global _papersdir
if _papersdir is None:
curdir = os.path.abspath('')
while curdir != '':
if (os.path.exists(curdir + '/.papers')
and os.path.isdir(curdir + '/.papers')):
_papersdir = curdir + '/.papers'
curdir = ''
if curdir == '/':
curdir = ''
else:
curdir = os.path.split(curdir)[0]
if _papersdir is None:
print '{}error{} : no papers repo found in this directory or in'
'any parent directory.{}'.format(color.red, color.grey, color.end)
exit(-1)
return _papersdir
def name_from_path(fullpdfpath, verbose=False):
name, ext = os.path.splitext(os.path.split(fullpdfpath)[1])
if verbose:
if ext != '.pdf' and ext != '.ps':
print('{}warning{}: extension {}{}{} not recognized{}'.format(
color.yellow, color.grey, color.cyan, ext, color.grey,
color.end))
return name, ext
def check_file(filepath):
if not os.path.exists(filepath):
print '{}error{}: {}{}{} does not exists{}'.format(
color.red, color.grey, color.cyan, filepath, color.grey,
color.end)
exit(-1)
if not os.path.isfile(filepath):
print '{}error{}: {}{}{} is not a file{}'.format(
color.red, color.grey, color.cyan, filepath, color.grey,
color.end)
exit(-1)
# yaml I/O
def write_yamlfile(filepath, datamap):
try:
with open(filepath, 'w') as f:
yaml.dump(datamap, f)
except IOError:
print '{}error{} : impossible to read file {}{:s}{}'.format(
color.red, color.grey, color.cyan, filepath, color.end)
exit(-1)
def read_yamlfile(filepath):
check_file(filepath)
try:
with open(filepath, 'r') as f:
return yaml.load(f)
except IOError:
print '{}error{} : impossible to read file {}{:s}{}'.format(
color.red, color.grey, color.cyan, filepath, color.end)
exit(-1)
def load_bibdata(filename, filepath):
return load_externalbibfile(filepath)
def save_bibdata(bib_data, filepath):
with open(filepath, 'w') as f:
parser = pybtex.database.output.bibyaml.Writer()
parser.write_stream(bib_data, f)
def save_meta(meta_data, filepath):
write_yamlfile(filepath, meta_data)
def load_meta(filepath):
return read_yamlfile(filepath)
# specific to bibliography data
def load_externalbibfile(fullbibpath):
check_file(fullbibpath)
filename, ext = os.path.splitext(os.path.split(fullbibpath)[1])
if ext == '.bib':
parser = pybtex.database.input.bibtex.Parser()
bib_data = parser.parse_file(fullbibpath)
elif ext == '.xml' or ext == '.bibtexml':
parser = pybtex.database.input.bibtexml.Parser()
bib_data = parser.parse_file(fullbibpath)
elif ext == '.yaml' or ext == '.bibyaml':
parser = pybtex.database.input.bibyaml.Parser()
bib_data = parser.parse_file(fullbibpath)
else:
print '{}error{}: {}{}{} not recognized format for bibliography{}'.format(
color.red, color.grey, color.cyan, ext, color.grey, color.end)
exit(-1)
return bib_data
# vim input
def vim_input(initial=""):
"""Use an editor to get input"""
with tempfile.NamedTemporaryFile(suffix=".tmp", delete=False) as temp_file:
tfile_name = temp_file.name
temp_file.write(initial)
temp_file.flush()
subprocess.call([EDITOR, tfile_name])
with open(tfile_name) as temp_file:
content = temp_file.read()
os.remove(tfile_name)
return content