Adds edit command.

papers/color.py

@@ -28,6 +28,7 @@ BCOLORS = {
 
 # application specific
 ALIASES = {
+    'ok'      : 'green',
     'error'   : 'red',
     'normal'  : 'grey',
     'citekey' : 'purple',

papers/commands/__init__.py

@@ -4,4 +4,5 @@ import import_cmd
 import init_cmd
 import list_cmd
 import open_cmd
+import edit_cmd
 import websearch_cmd

papers/commands/edit_cmd.py

@@ -0,0 +1,29 @@
+import subprocess
+
+from ..color import colored
+from .. import repo
+
+
+def parser(subparsers, config):
+    parser = subparsers.add_parser('edit',
+            help=colored('open the paper bibliographic file in an editor',
+                'normal'))
+    parser.add_argument('reference',
+            help=colored('reference to the paper (citekey or number)',
+                'normal'))
+    return parser
+
+
+def command(config, reference):
+    rp = repo.Repository.from_directory()
+    key = rp.citekey_from_ref(reference, fatal=True)
+    filepath = rp.path_to_paper_file(key, 'bib')
+    subprocess.call([config.get('papers', 'edit-cmd'),
+        filepath])
+    # TODO use editor_input from files.py instead of directly editing the file.
+    # Then chack that output file is correctly formmatted and that citekey has
+    # not changed or is still a valid citekey.
+    print('{} editing {}.'.format(
+        colored('Done', 'ok'),
+        colored(filepath, 'filepath')
+        ))

papers/commands/list_cmd.py

@@ -14,9 +14,8 @@ def parser(subparsers, config):
 def command(config):
     rp = repo.Repository.from_directory()
     articles = []
-    for n in range(rp.size()):
+    for n, p in enumerate(rp.all_papers()):
-        paper = rp.paper_from_number(n, fatal=True)
+        bibdesc = pretty.bib_oneliner(p.bibentry)
-        bibdesc = pretty.bib_oneliner(paper.bibentry)
         articles.append((u'{num:d}: [{citekey}] {descr}'.format(
             num=int(n),
             citekey=colored(rp.citekeys[n], 'purple'),

papers/commands/open_cmd.py

@@ -15,7 +15,7 @@ def parser(subparsers, config):
 
 def command(config, citekey):
     rp = repo.Repository.from_directory()
-    paper = rp.paper_from_any(citekey, fatal=True)
+    paper = rp.paper_from_ref(citekey, fatal=True)
     try:
         if paper.check_file():
             filepath = paper.get_file_path()

papers/configs.py

@@ -3,7 +3,10 @@ import ConfigParser
 
 
 DEFAULT_OPEN_CMD = 'open'
-DEFAULT_EDIT_CMD = 'vim'
+try:
+    DEFAULT_EDIT_CMD = os.environ['EDITOR']
+except KeyError:
+    DEFAULT_EDIT_CMD = 'vi'
 
 DEFAULT_IMPORT_COPY = 'yes'
 DEFAULT_IMPORT_MOVE = 'no'

papers/files.py

@@ -26,10 +26,6 @@ except ImportError:
 
 _papersdir = None
 
-try:
-    EDITOR = os.environ['EDITOR']
-except KeyError:
-    EDITOR = 'nano'
 BIB_EXTENSIONS = ['.bib', '.bibyaml', '.bibml', '.yaml']
 
 
@@ -151,16 +147,14 @@ def load_externalbibfile(fullbibpath):
     return bib_data
 
 
-# vim input
+def editor_input(editor, initial=""):
-
-def vim_input(initial=""):
     """Use an editor to get input"""
 
     with tempfile.NamedTemporaryFile(suffix=".tmp", delete=False) as temp_file:
         tfile_name = temp_file.name
         temp_file.write(initial)
         temp_file.flush()
-        subprocess.call([EDITOR, tfile_name])
+        subprocess.call([editor, tfile_name])
 
     with open(tfile_name) as temp_file:
         content = temp_file.read()

papers/papers

@@ -2,8 +2,6 @@
 # -*- coding:utf-8 -*-
 
 
-import os
-
 import argparse
 import collections
 
@@ -16,6 +14,7 @@ cmds = collections.OrderedDict([
         ('add_library', commands.add_library_cmd),
         ('import', commands.import_cmd),
         ('list', commands.list_cmd),
+        ('edit', commands.edit_cmd),
         ('open', commands.open_cmd),
         ('websearch', commands.websearch_cmd)
         ])

papers/repo.py

@@ -20,46 +20,32 @@ class Repository(object):
 
     # loading existing papers
 
-    def paper_from_number(self, number, fatal=True):
+    def paper_from_citekey(self, citekey):
-        try:
-            citekey = self.citekeys[int(number)]
-            paper = self.paper_from_citekey(citekey)
-            return paper
-        except (IndexError, ValueError):
-            if fatal:
-                print(colored('error', 'error')
-                        + ': no paper with number {}'.format(
-                    colored(number, 'citekey')))
-                exit(-1)
-            raise(IOError('file not found'))
-
-    def paper_from_citekey(self, citekey, fatal=True):
         """Load a paper by its citekey from disk, if necessary."""
-        if citekey in self.citekeys:
+        return Paper.load(self.path_to_paper_file(citekey, 'bib'),
-            return Paper.load(self.path_to_paper_file(citekey, 'bib'),
+            metapath=self.path_to_paper_file(citekey, 'meta'))
-                metapath=self.path_to_paper_file(citekey, 'meta'))
+
+    def citekey_from_ref(self, ref, fatal=True):
+        """Tries to get citekey from given ref.
+        Ref can be a citekey or a number.
+        """
+        if ref in self.citekeys:
+            return ref
         else:
-            if fatal:
-                print(colored('error', 'error')
-                        + ': no paper with citekey {}'.format(
-                       colored(citekey, 'citekey')))
-                exit(-1)
-            raise(IOError('file not found'))
-
-    def paper_from_any(self, key, fatal=True):
-        try:
-            return self.paper_from_citekey(key, fatal=False)
-        except IOError:
             try:
-                return self.paper_from_number(key, fatal=False)
+                return self.citekeys[int(ref)]
-            except IOError:
+            except (IndexError, ValueError):
                 if fatal:
                     print(colored('error', 'error')
-                            + (': paper with citekey or number %s not found'
+                            + ': no paper with reference {}'.format(
-                                % colored(key, 'citekey')))
+                        colored(ref, 'citekey')))
                     exit(-1)
                 raise(IOError('file not found'))
 
+    def paper_from_ref(self, ref, fatal=True):
+        key = self.citekey_from_ref(ref, fatal=fatal)
+        return self.paper_from_citekey(key)
+
     # creating new papers
 
     def add_paper_from_paths(self, docpath, bibpath):
@@ -137,6 +123,10 @@ class Repository(object):
         else:
             return os.path.join(self.papersdir, DOC_DIR)
 
+    def all_papers(self):
+        for key in self.citekeys:
+            yield self.paper_from_citekey(key)
+
     @classmethod
     def from_directory(cls, papersdir=None):
         repo = cls()