import os import subprocess import tempfile import yaml from .color import colored try: import pybtex import pybtex.database import pybtex.database.input import pybtex.database.input.bibtex import pybtex.database.input.bibtexml import pybtex.database.input.bibyaml import pybtex.database.output import pybtex.database.output.bibtex import pybtex.database.output.bibtexml import pybtex.database.output.bibyaml except ImportError: print(colored('error', 'error') + ': you need to install Pybtex; try running \'pip install' 'pybtex\' or \'easy_install pybtex\'') _papersdir = None BIB_EXTENSIONS = ['.bib', '.bibyaml', '.bibml', '.yaml'] FORMATS = {'bib': pybtex.database.input.bibtex, 'xml': pybtex.database.input.bibtexml, 'yml': pybtex.database.input.bibyaml, 'yaml': pybtex.database.input.bibyaml, 'bibyaml': pybtex.database.input.bibyaml} def clean_path(path): return os.path.abspath(os.path.expanduser(path)) def find_papersdir(): """Find .papers directory in this directory and the parent directories""" global _papersdir if _papersdir is None: curdir = os.path.abspath('') while curdir != '': curdir_path = os.path.join(clean_path(curdir), '.papers') if (os.path.exists(curdir_path) and os.path.isdir(curdir_path)): _papersdir = curdir + '/.papers' curdir = '' if curdir == '/': curdir = '~' elif curdir == '~': curdir = '' else: curdir = os.path.split(curdir)[0] if _papersdir is None: print (colored('error', 'error') + ': no papers repo found in this directory or in ' 'any parent directory.') exit(-1) return _papersdir def name_from_path(fullpdfpath, verbose=False): name, ext = os.path.splitext(os.path.split(fullpdfpath)[1]) if verbose: if ext != '.pdf' and ext != '.ps': print(colored('warning', 'yellow') + '{: extension {ext} not recognized'.format( ext=colored(ext, 'cyan'))) return name, ext def check_file(filepath): if not os.path.exists(filepath): print(colored('error', 'error') + ': {} does not exists'.format( colored(filepath, 'filepath'))) exit(-1) if not os.path.isfile(filepath): print(colored('error', 'error') + ': {} is not a file'.format( colored(filepath, 'filepath'))) exit(-1) # yaml I/O def write_yamlfile(filepath, datamap): try: with open(filepath, 'w') as f: yaml.dump(datamap, f) except IOError: print(colored('error', 'error') + ': impossible to read file {}'.format( colored(filepath, 'filepath'))) exit(-1) def read_yamlfile(filepath): check_file(filepath) try: with open(filepath, 'r') as f: return yaml.load(f) except IOError: print(colored('error', 'error') + ': impossible to read file {}'.format( colored(filepath, 'filepath'))) exit(-1) def load_bibdata(filename, filepath): return load_externalbibfile(filepath) def save_bibdata(bib_data, filepath): with open(filepath, 'w') as f: parser = pybtex.database.output.bibyaml.Writer() parser.write_stream(bib_data, f) def save_meta(meta_data, filepath): write_yamlfile(filepath, meta_data) def load_meta(filepath): return read_yamlfile(filepath) # specific to bibliography data def load_externalbibfile(fullbibpath): check_file(fullbibpath) filename, ext = os.path.splitext(os.path.split(fullbibpath)[1]) if ext[1:] in FORMATS.keys(): with open(fullbibpath) as f: return parse_bibdata(f, ext[1:]) else: print(colored('error', 'error') + ': {} not recognized format for bibliography'.format( colored(ext, 'cyan'))) exit(-1) def parse_bibdata(content, format_): """Parse bib data from string. :content: stream :param format_: (bib|xml|yml) """ parser = FORMATS[format_].Parser() return parser.parse_stream(content) def editor_input(editor, initial=""): """Use an editor to get input""" with tempfile.NamedTemporaryFile(suffix=".tmp", delete=False) as temp_file: tfile_name = temp_file.name temp_file.write(initial) temp_file.flush() subprocess.call([editor, tfile_name]) with open(tfile_name) as temp_file: content = temp_file.read() os.remove(tfile_name) return content