151 Commits (5370a5d26bf2bd4fc3373a5501c3bef76373a48e)

Author SHA1 Message Date
Alex Selimov 5370a5d26b Merge ft--disl
4 years ago
Alex Selimov fa5047b735 Fix to error checking in writing .xyz files
4 years ago
Alex Selimov 1c7c028dd8 Merge branch 'ft--group-shell' into development
4 years ago
Alex Selimov 29df0f9eb2 Fix to opt_group which got the code working
4 years ago
Alex Selimov 2c42520102 Restructure group code, add group shell, and add refinefill option
4 years ago
Alex Selimov 4f3d88b774 Fix to reading and writing .xyz data
4 years ago
Alex Selimov f92e80f9db Added fixes to redef_box and to writing pycac restart files
4 years ago
Alex Selimov 077574ea8d Added disl option
4 years ago
Alex Selimov 0620a07847 Added some calc and metric changes
4 years ago
Alex Selimov 153b95194f Mode calc with tot_virial calculation
4 years ago
Alex Selimov 4dcaddb2cb Manual merge of control box code
4 years ago
Alex Selimov 0929400d19 Merge branch 'ft--option-slip-plane' into development
4 years ago
Alex Selimov a528dc4c52 Final fix to get working opt_slip_plane
4 years ago
Alex Selimov 068b5d99a9 Fix to gfortran compatibility
4 years ago
Alex Selimov 84a84e578a Working version of slip_plane ooption with effill
4 years ago
Alex Selimov b9ce916e42 Current working changes to option-slip-plane
4 years ago
Alex Selimov fa38875296 merge changes
4 years ago
Alex Selimov 51079148cc Get code working with gfortran
4 years ago
Alex Selimov f63335708b Working changes
4 years ago
Alex Selimov 22e250093b Working changes. Working on the efill code
4 years ago
Alex Selimov b5629b1563 Working changes to slip_plane code
4 years ago
Alex Selimov 2ea388b82a Current working changes with some updates to comments for accuracy
4 years ago
Alex Selimov 6e08517697 Working continuum metric calculation code
4 years ago
Alex Selimov 95e2ad0b4d Current working changes to control-box code
4 years ago
Alex Selimov 5949f04103 Working read from pycac.out file format
4 years ago
Alex Selimov dadc1f7a4a Fixed the efill option to preserve interelement discontinuities
4 years ago
Alex Selimov c42db27f57 Working redef box option
4 years ago
Alex Selimov b658202a1e First testing version of code
4 years ago
Alex Selimov fb236f4ab4 Fix to opt_orient to preserve boundary conditions
4 years ago
Alex Selimov 1e1c08e546 Added group shape all to seleect all of a specific type
4 years ago
Alex Selimov 73fca4a0d8 Added efill zigzag code which adjusts the efill option
4 years ago
Alex Selimov 4c75fac13c Working change group type command
4 years ago
Alex Selimov c4afde2743 Working changes to group
4 years ago
Alex Selimov 96e2242573 Fix to writing pycac files
4 years ago
Alex Selimov 724e573287 Added deform box option and allowed for reading time information from restart files
4 years ago
Alex Selimov 8d939ed942 Merge bcc to development branch
5 years ago
Alex Selimov a0ecc7da90 Fix to problem with read-CAC due to changes in add_atom and add_element methods)
5 years ago
Alex Selimov 2fda952d3f Merge read-cac branch into main branch
5 years ago
Alex Selimov a47c384a3f Added tags to the element and atom arrays
5 years ago
Alex Selimov 338587b7b7 Added sphere as a possible group shape
5 years ago
Alex Selimov b52d7761e0 First working version of reading in .cac format. Works for two separate orientations
5 years ago
Alex Selimov d01d0b0c57 Quick fix to code to allow for reading in larger numbers of esizes
5 years ago
Alex Selimov 65c2b380cd Added flip option to group to invert group selection
5 years ago
Alex Selimov 43025d0b67 Quick fix to efill code
5 years ago
Alex Selimov aef9da49be Added greater range of element sizes
5 years ago
Alex Selimov 080f19d644 Update .xyz file format to include element and atom files
5 years ago
Alex Selimov e5eec7a7cd Added random option which can be used to create vacancy fields
5 years ago
Alex Selimov 5dda0e3b81 Added efill option
5 years ago
Alex Selimov 8693d7aaa9 Initial testing of efill code
5 years ago
Alex Selimov 8cb9787ea2 Added functionality so you can refine elements prior to operating on the group
5 years ago